BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F11SP1|AL426081
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1777 1600 0.0
>3x_Contig1777
Length = 26319
Score = 1600 bits (807), Expect = 0.0
Identities = 814/815 (99%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 1 aaacctaacattaggctggtcgatggacatactcatcgaaaggttatcgctaagagcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6174 aaacctaacattaggctggtcgatggacatactcatcgaaaggttatcgctaagagcatc 6233
Query: 61 gttattacttttcatggactgaaatcgcatcaatgagtttgagatatcttgttgcggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6234 gttattacttttcatggactgaaatcgcatcaatgagtttgagatatcttgttgcggcaa 6293
Query: 121 tattgtattaggtttcatagttcaactctttcttgtcttccaagagtttcacaaactcta 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6294 tattgtattaggtttcat-gttcaactctttcttgtcttccaagagtttcacaaactcta 6352
Query: 181 acaaatcttccggtgggttttcagtggatttccttggtttagcggtcctgtcaaaacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6353 acaaatcttccggtgggttttcagtggatttccttggtttagcggtcctgtcaaaacttt 6412
Query: 241 ctgatcttctaatactagaatgacggcggatcctgccaaaagatgaagaatatttcgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6413 ctgatcttctaatactagaatgacggcggatcctgccaaaagatgaagaatatttcgatc 6472
Query: 301 cgctaccaacactagaaagttctggtggtacatcaccatttactatagtagacccggcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6473 cgctaccaacactagaaagttctggtggtacatcaccatttactatagtagacccggcac 6532
Query: 361 taccacgttgaactttcaacgcagcaaccactgatgaactcgaaacattccttgataaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6533 taccacgttgaactttcaacgcagcaaccactgatgaactcgaaacattccttgataaac 6592
Query: 421 ttggaacaagactcgtagtcgactgggcactgccactctgtacaaacgagccactcccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 ttggaacaagactcgtagtcgactgggcactgccactctgtacaaacgagccactcccaa 6652
Query: 481 ctgatccaactttaaaaggttgcagtttagaagagatggattgccttcttgccgatgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6653 ctgatccaactttaaaaggttgcagtttagaagagatggattgccttcttgccgatgaac 6712
Query: 541 cttctaggggaaaaagcgtcgcattgatggtatttgtcttgggggaaactgacatagatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6713 cttctaggggaaaaagcgtcgcattgatggtatttgtcttgggggaaactgacatagatc 6772
Query: 601 tgctacaattggatgaagcccttctatcaggtaccgtggtagtttcattagataaggatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6773 tgctacaattggatgaagcccttctatcaggtaccgtggtagtttcattagataaggatg 6832
Query: 661 gtgtcatgtatcgtttttgtaaatcatctgaatcaataacataaaagtcgacatcttttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6833 gtgtcatgtatcgtttttgtaaatcatctgaatcaataacataaaagtcgacatcttttc 6892
Query: 721 tataagacaccgtgatacgcaacgagccaaatgtagtttttatcggtgtaatctttcgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6893 tataagacaccgtgatacgcaacgagccaaatgtagtttttatcggtgtaatctttcgtt 6952
Query: 781 gttctagatgtgaagcaatgtttgtttcattcatt 815
|||||||||||||||||||||||||||||||||||
Sbjct: 6953 gttctagatgtgaagcaatgtttgtttcattcatt 6987
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5879
Number of Sequences: 1807
Number of extensions: 5879
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)